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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919500.1_cds_XP_016468691.1_61300
CDS Infomation

[gene=LOC107791190] [db_xref=GeneID:107791190] [protein=bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016468691.1] [location=complement(join(30768..30808,30910..31072,32932..33080,33210..33347,33436..33541,33685..33748,34048..>34394))] [gbkey=CDS]
Sequence

GTACCAATAATAGCCATGGTCATGGGAGAGAAGGGTTTGATGTCTCGAATACTTTGTCCA
AAATTTGGTGGATACCTCACATTTGGTACTCTTGAAGTGGGAAAGGTTTCGGCTCCTGGG
CAACCAACAATTAAAGATCTTTTGAATATATACAATTTCAGACAGTTGGGACCAGATACC
AGAATATTTGGCATTATCGGGAAGCCTGTTAGCCATAGCAAATCACCTTTATTGTATAAT
GAAGCTTTCAGATCAGTTGGGTTTAATGGTGTTTATATGCCTTTGCTGGTTGATGATGTT
GCAAATTTCTTTCGGACTTACTCATCTTTAGATTTTGCTGGCTTCAGCTGTACAATTCCT
CACAAGGAAGCCATTGTTGACTGCTGTGATGAAGTTGATCCTACCGCTAAGTTAATAGGG
GCTGTCAATTGTGTCGTAAGGCGACCTGATGGGAAGTTGTTTGGTTGCAATACAGACTAT
GTGGGTGCAATCTCCGCCATTGAAGAAGCGTTGCAAGGCTCACAGCCTAGTATGTCTGGG
TCTCCCTTAGCTGGTAAATTATTTGTGGTCATTGGTGCTGGTGGCGCTGGCAAGGCACTT
GCTTATGGTGCAAAGGAAAAGGGGGCTCGGGTGGTGATTGCTAACCGTACCTATGAACGA
GCGAGAGAACTTGCTGATGTAGTTGGAGGTCAGGCTTTGTCTCTTGACGAGCTTAGCAAT
TTCCATCCAGAAAATGACATGATTCTTGCAAATACCACCTCCATTGGCATGCAACCAAAG
GTTGATGATACACCAATCTTTAAGGAAGCTTTGAGGTACTACTCACTTGTATTTGATGCT
GTTTATACGCCCAAAATCACTAGACTCTTGCGGGAAGCTCACGAGAGTGGAGTAAAAATT
GTAACAGGAGTTGAAATGTTTATCGGCCAGGCATATGAACAATATGAGAGATTTACAGGG
TTGCCAGCTCCAAAGGAACTTTTCAAGAAAATTATGGCTGGATATTGA

Peptide Sequence

PEP ID

XP_016468691.1
PEP Infomation

PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Nicotiana tabacum]
Sequence

MELVVDSGVRKMEGEAMTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKS
FNPQSDIDTIIKQSPLPTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAI
DEFNTALHGNKSAKCKVIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDV
ARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLN
IYNFRQLGPDTRIFGIIGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSS
LDFAGFSCTIPHKEAIVDCCDEVDPTAKLIGAVNCVVRRPDGKLFGCNTDYVGAISAIEE
ALQGSQPSMSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVG
GQALSLDELSNFHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRL
LREAHESGVKIVTGVEMFIGQAYEQYERFTGLPAPKELFKKIMAGY

Transcript Sequence

Gene sequence data has not been registered.